BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB008B12SP1|AL425821
(811 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1609 1608 0.0
3x_Contig1551 983 0.0
>3x_Contig1609
Length = 15966
Score = 1608 bits (811), Expect = 0.0
Identities = 811/811 (100%)
Strand = Plus / Minus
Query: 1 acatagcaagggtttttttctctccgttgacagcaatcaaacatacatcgacgtcagaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7974 acatagcaagggtttttttctctccgttgacagcaatcaaacatacatcgacgtcagaaa 7915
Query: 61 acactttatttggatcaactatctcgatctctttaaacaacgaagaattaaagaaactag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7914 acactttatttggatcaactatctcgatctctttaaacaacgaagaattaaagaaactag 7855
Query: 121 tcaaatataccttgataacttccatcgacggcaagcagccgcacaaggcatctaacaccg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7854 tcaaatataccttgataacttccatcgacggcaagcagccgcacaaggcatctaacaccg 7795
Query: 181 agttaccacttcttaaaagaattggattgccaacggagtaaacttcatccatttcaatga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7794 agttaccacttcttaaaagaattggattgccaacggagtaaacttcatccatttcaatga 7735
Query: 241 catgaacgtatttcttctccattcgttcagcttttcttcaatagttttccaaatctcaga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7734 catgaacgtatttcttctccattcgttcagcttttcttcaatagttttccaaatctcaga 7675
Query: 301 gtagtgccaccccattcgagacgatattatcaatcatcgaactgacgttgatccatatgt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7674 gtagtgccaccccattcgagacgatattatcaatcatcgaactgacgttgatccatatgt 7615
Query: 361 caacactcttccatacttagaagaattgtaccaaagtttggtcaacgggtcagcggtgtt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7614 caacactcttccatacttagaagaattgtaccaaagtttggtcaacgggtcagcggtgtt 7555
Query: 421 tttgtccgattctcacgaagttgtgacttgagaattccaattttagctatcaggtgcgac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7554 tttgtccgattctcacgaagttgtgacttgagaattccaattttagctatcaggtgcgac 7495
Query: 481 ttggatagttactttgttccatcgaccagctgcaattgcagattcacattgcagacacat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7494 ttggatagttactttgttccatcgaccagctgcaattgcagattcacattgcagacacat 7435
Query: 541 tcatagtctttcttcaaacatgctgaacaactggctgcttttcgatcatacttcttttta 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7434 tcatagtctttcttcaaacatgctgaacaactggctgcttttcgatcatacttcttttta 7375
Query: 601 cgtctttggcacatcggacttgatctcttcgggttgtttctgcttttaggcattccagaa 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7374 cgtctttggcacatcggacttgatctcttcgggttgtttctgcttttaggcattccagaa 7315
Query: 661 tagatcactcgcactcacgcacttttttcccctaataatggatcagcaaagctaatcaat 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7314 tagatcactcgcactcacgcacttttttcccctaataatggatcagcaaagctaatcaat 7255
Query: 721 ggtcaattgctgggattcagagaaaattttacgaataccgccaggcgggaacgaacatgc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7254 ggtcaattgctgggattcagagaaaattttacgaataccgccaggcgggaacgaacatgc 7195
Query: 781 taaaccagataaattactgcacgaataacta 811
|||||||||||||||||||||||||||||||
Sbjct: 7194 taaaccagataaattactgcacgaataacta 7164
>3x_Contig1551
Length = 9073
Score = 983 bits (496), Expect = 0.0
Identities = 726/800 (90%), Gaps = 2/800 (0%)
Strand = Plus / Minus
Query: 14 ttttttctctccgttgacagcaatcaaacatacatcgacgtcagaaaacactttatttgg 73
|||| |||| || ||||||||||| ||||||| ||| |||||||| ||||||||||||||
Sbjct: 1284 ttttatctccccattgacagcaattaaacatagatcaacgtcagagaacactttatttgg 1225
Query: 74 atcaactatctcgatctctttaaacaacgaagaattaaagaaactagtcaaatatacctt 133
|||||||||||||| ||||||||||||||||||||| ||||||||||| |||||||| ||
Sbjct: 1224 atcaactatctcgaactctttaaacaacgaagaattgaagaaactagttaaatatacttt 1165
Query: 134 gataacttccatcgacggcaagcagccgcacaaggcatctaacaccgagttaccacttct 193
|||||| |||||||||||||||||||||||||||||||||| ||| || |||||||||||
Sbjct: 1164 gataacgtccatcgacggcaagcagccgcacaaggcatctagcacagaattaccacttct 1105
Query: 194 taaaagaattggattgccaacggagtaaacttcatccatttcaatgacatgaacgtattt 253
||||||||||||||||||||||||||||||||| ||||||| ||| ||||||||| |||
Sbjct: 1104 taaaagaattggattgccaacggagtaaacttcctccattttgatggcatgaacgtgttt 1045
Query: 254 cttct-ccattcgttcagcttttcttcaatagttttccaaatctcagagtagtgccaccc 312
||||| |||||||||| ||||||||| |||||||||||||||||||||||||| ||||||
Sbjct: 1044 cttcttccattcgttccgcttttctttaatagttttccaaatctcagagtagtaccaccc 985
Query: 313 cattcgagacgatattatcaatcatcgaactgacgttgatccatatgtcaacactcttcc 372
||| |||||||| ||||||| ||||||||||| |||| |||||||||||||||||||||
Sbjct: 984 catacgagacgactttatcaaacatcgaactgatgttggtccatatgtcaacactcttcc 925
Query: 373 atacttagaagaattgtaccaaagtttggtcaacgggtcagcggtgtttttgtccgattc 432
|||||| ||||| ||||||||||||| |||||||| | | ||||||||||||| ||||
Sbjct: 924 atacttggaagatgtgtaccaaagtttagtcaacggattaccggtgtttttgtcggattt 865
Query: 433 t-cacgaagttgtgacttgagaattccaattttagctatcaggtgcgacttggatagtta 491
| ||||||||||||| ||||||| ||||||||||||||||| ||||||||||||||||
Sbjct: 864 ttcacgaagttgtgatgtgagaatgccaattttagctatcagttgcgacttggatagttg 805
Query: 492 ctttgttccatcgaccagctgcaattgcagattcacattgcagacacattcatagtcttt 551
||||||||||||||||| |||| ||||||||||||||||| ||| ||||||||| ||||
Sbjct: 804 ctttgttccatcgaccaactgcgattgcagattcacattgtagatgcattcatagccttt 745
Query: 552 cttcaaacatgctgaacaactggctgcttttcgatcatacttctttttacgtctttggca 611
|||||||| ||||||||||||| |||||| |||||| ||||||| ||||||||||||||
Sbjct: 744 tttcaaacacgctgaacaactgggtgctttccgatcacacttcttcttacgtctttggca 685
Query: 612 catcggacttgatctcttcgggttgtttctgcttttaggcattccagaatagatcactcg 671
||| ||| ||||||| |||| |||||||||||||||||||||| |||||||||| |||
Sbjct: 684 cataagacatgatctcgtcggcttgtttctgcttttaggcattcgggaatagatcaatcg 625
Query: 672 cactcacgcacttttttcccctaataatggatcagcaaagctaatcaatggtcaattgct 731
||| ||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 624 cacccacacacttttttcccctaataatgaatcagcaaagctaatcaatggtcaattgct 565
Query: 732 gggattcagagaaaattttacgaataccgccaggcgggaacgaacatgctaaaccagata 791
|||| |||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||
Sbjct: 564 gggaatcagagaaaactttacgaataccgccaggcgggaacaaacctgctaaaccagata 505
Query: 792 aattactgcacgaataacta 811
|| ||||| |||||||||||
Sbjct: 504 aactactgtacgaataacta 485
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6326
Number of Sequences: 1807
Number of extensions: 6326
Number of successful extensions: 40
Number of sequences better than 1.0e-20: 2
length of query: 811
length of database: 10,358,551
effective HSP length: 16
effective length of query: 795
effective length of database: 10,329,639
effective search space: 8212063005
effective search space used: 8212063005
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)